Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 3385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
22678 bp
Thymine Count
21551 bp
Guanine Count
23522 bp
Cytosine Count
21572 bp
Genome Length
89323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
12 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trba | DFS94_RS25345 | Not Available | Positive | 63887 - 64207 | 11994.3 |
| type-f conjugative transfer system pilin chaperone traq | DFS94_RS25350 | Not Available | Positive | 64334 - 64618 | 10754.3 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | DFS94_RS25355 | Not Available | Positive | 64605 - 65150 | 20013.2 |
| p-type conjugative transfer protein trbj | DFS94_RS25360 | Not Available | Positive | 65080 - 65427 | 12975.0 |
| f-type conjugal transfer protein trbf | DFS94_RS25365 | Not Available | Positive | 65408 - 65800 | 15042.4 |
| conjugal transfer pilus assembly protein trah | DFS94_RS25370 | Not Available | Positive | 65787 - 67160 | 50545.6 |
| conjugal transfer mating-pair stabilization protein trag | DFS94_RS25375 | Not Available | Positive | 67157 - 69976 | 102834.0 |
| entry exclusion protein | DFS94_RS25380 | Not Available | Positive | 69995 - 70492 | 19070.3 |
| conjugal transfer complement resistance protein trat | DFS94_RS25385 | Not Available | Positive | 70524 - 71255 | 25945.2 |
| hypothetical protein | DFS94_RS25390 | Not Available | Positive | 71458 - 72237 | 28956.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





