Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 3385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 3385 plasmid unnamed2, complete sequence.
Gene Summary
Adenine Count
22678 bp
Thymine Count
21551 bp
Guanine Count
23522 bp
Cytosine Count
21572 bp
Genome Length
89323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
12 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| invasion regulator sirb1 | DFS94_RS02195 | Not Available | Positive | 399037 - 399846 | 30843.1 |
| 3-deoxy-8-phosphooctulonate synthase | DFS94_RS02200 | Not Available | Positive | 399882 - 400736 | 30834.5 |
| type i toxin-antitoxin system toxin ldr family protein | DFS94_RS02205 | Not Available | Negative | 400885 - 400992 | 4041.11 |
| sodium-potassium/proton antiporter chaa | DFS94_RS02215 | Not Available | Negative | 401397 - 402497 | 39166.9 |
| putative cation transport regulator chab | DFS94_RS02220 | Not Available | Positive | 402767 - 403006 | 9292.53 |
| glutathione-specific gamma-glutamylcyclotransferase | DFS94_RS02225 | Not Available | Positive | 403155 - 403850 | 25529.7 |
| dsre/f sulfur relay family protein ychn | DFS94_RS02230 | Not Available | Negative | 403894 - 404247 | 12720.6 |
| inverse autotransporter invasin ycho | DFS94_RS02235 | Not Available | Positive | 404432 - 405826 | 52170.7 |
| two-component system response regulator narl | DFS94_RS02240 | Not Available | Negative | 405827 - 406477 | 23928.3 |
| nitrate/nitrite two-component system sensor histidine kinase narx | DFS94_RS02245 | Not Available | Negative | 406470 - 408266 | 67102.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





