Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 3385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
22678 bp
Thymine Count
21551 bp
Guanine Count
23522 bp
Cytosine Count
21572 bp
Genome Length
89323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
12 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1-like element is1b family transposase | DFS94_RS25045 | Not Available | Positive | 19570 - 20267 | 26573.3 |
| duf2726 domain-containing protein | DFS94_RS25050 | Not Available | Positive | 20283 - 20612 | 12299.5 |
| homocysteine s-methyltransferase | DFS94_RS25055 | Not Available | Negative | 20721 - 21653 | 33424.6 |
| s-methylmethionine permease | DFS94_RS25060 | Not Available | Negative | 21640 - 23043 | 50500.6 |
| replication initiation protein repe | DFS94_RS25145 | Not Available | Positive | 38309 - 39064 | 29360.2 |
| plasmid-partitioning protein sopa | DFS94_RS25150 | Not Available | Positive | 39652 - 40818 | 43662.6 |
| parb/repb/spo0j family plasmid partition protein | DFS94_RS25155 | Not Available | Positive | 40818 - 41789 | 35318.2 |
| duf1281 domain-containing protein | DFS94_RS25170 | Not Available | Positive | 42656 - 43558 | 34085.8 |
| hypothetical protein | DFS94_RS25175 | Not Available | Positive | 43555 - 43866 | 11994.3 |
| dna methylase | DFS94_RS25180 | Not Available | Positive | 43943 - 44626 | 25556.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





