Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 3385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 3385 plasmid unnamed2, complete sequence.
Gene Summary
Adenine Count
22678 bp
Thymine Count
21551 bp
Guanine Count
23522 bp
Cytosine Count
21572 bp
Genome Length
89323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
12 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DFS94_RS21485 | Not Available | Positive | 4350417 - 4351487 | 39432.1 |
| trna guanosine(34) transglycosylase tgt | DFS94_RS21490 | Not Available | Positive | 4351542 - 4352669 | 42596.1 |
| preprotein translocase subunit yajc | DFS94_RS21495 | Not Available | Positive | 4352692 - 4353024 | 11887.9 |
| protein translocase subunit secd | DFS94_RS21500 | Not Available | Positive | 4353052 - 4354899 | 66609.3 |
| protein translocase subunit secf | DFS94_RS21505 | Not Available | Positive | 4354910 - 4355881 | 35384.6 |
| hnh nuclease yajd | DFS94_RS21510 | Not Available | Positive | 4356011 - 4356358 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | DFS94_RS21515 | Not Available | Negative | 4356396 - 4357280 | 33625.6 |
| duf3251 domain-containing protein | DFS94_RS21520 | Not Available | Negative | 4357579 - 4358118 | 19563.6 |
| transcriptional regulator nrdr | DFS94_RS21525 | Not Available | Positive | 4358269 - 4358718 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DFS94_RS21530 | Not Available | Positive | 4358722 - 4359825 | 40396.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





