Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 3385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
22678 bp
Thymine Count
21551 bp
Guanine Count
23522 bp
Cytosine Count
21572 bp
Genome Length
89323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
12 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvry/sira/gaca family response regulator transcription factor | DFS94_RS05520 | Not Available | Negative | 1048920 - 1049576 | 23864.1 |
| protein yecu | DFS94_RS05525 | Not Available | Positive | 1049872 - 1050048 | 6795.52 |
| duf2594 family protein yecf | DFS94_RS05530 | Not Available | Positive | 1050035 - 1050259 | 8239.04 |
| Helix-turn-helix transcriptional regulator | DFS94_RS05535 | Not Available | Negative | 1050327 - 1051049 | 28036.8 |
| Abc transporter | DFS94_RS05540 | Not Available | Negative | 1051279 - 1052031 | 27705.8 |
| Attl | Not Available | Not Available | Positive | 1093669 - 1093680 | Not Available |
| Attl | Not Available | Not Available | Positive | 1093724 - 1093736 | Not Available |
| Isrso11-transposase orfb protein | DFS94_RS05825 | Not Available | Negative | 1095455 - 1096803 | 51896.5 |
| metal-binding protein zint | DFS94_RS05830 | Not Available | Positive | 1097064 - 1097714 | 24786.2 |
| Hypothetical protein | DFS94_RS05835 | Not Available | Negative | 1098795 - 1099082 | 10686.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





