Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease domain-containing protein | CPT03_RS04895 | Not Available | Negative | 1200865 - 1202235 | 51176.1 |
| response regulator | CPT03_RS04900 | Not Available | Positive | 1202425 - 1202790 | 13292.2 |
| osmc family protein | CPT03_RS04905 | Not Available | Negative | 1202854 - 1203255 | 14805.9 |
| hypothetical protein | CPT03_RS04910 | Not Available | Positive | 1203413 - 1203655 | 9348.14 |
| nucleoside recognition domain-containing protein | CPT03_RS04915 | Not Available | Negative | 1203641 - 1204912 | 45301.8 |
| prolyl oligopeptidase family serine peptidase | CPT03_RS04920 | Not Available | Negative | 1204965 - 1207748 | 104939.0 |
| membrane protein insertase yidc | CPT03_RS04925 | Not Available | Negative | 1207902 - 1209710 | 68118.5 |
| ctp synthase | CPT03_RS04930 | Not Available | Negative | 1209731 - 1211347 | 59978.1 |
| glpgli family protein | CPT03_RS04935 | Not Available | Negative | 1211542 - 1212252 | 27285.9 |
| outer membrane beta-barrel family protein | CPT03_RS04940 | Not Available | Negative | 1212309 - 1215077 | 103905.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

