Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CPT03_RS04795 | Not Available | Negative | 1179425 - 1181347 | 73625.9 |
| Trna-arg | Not Available | Not Available | Positive | 1181606 - 1181679 | Not Available |
| glycoside hydrolase family 36 protein | CPT03_RS04805 | Not Available | Positive | 1181953 - 1183842 | 71350.4 |
| hypothetical protein | CPT03_RS04810 | Not Available | Positive | 1183883 - 1184317 | 16443.3 |
| hypothetical protein | CPT03_RS04815 | Not Available | Positive | 1184386 - 1185039 | 24707.3 |
| duf4091 domain-containing protein | CPT03_RS04820 | Not Available | Negative | 1185110 - 1186840 | 65884.3 |
| helix-turn-helix domain-containing protein | CPT03_RS04825 | Not Available | Negative | 1186885 - 1187373 | 18644.3 |
| clpxp adapter spxh family protein | CPT03_RS04830 | Not Available | Positive | 1187485 - 1188432 | 36003.9 |
| tonb-dependent receptor | CPT03_RS04835 | Not Available | Positive | 1188594 - 1191017 | 89568.4 |
| pepsy-associated tm helix domain-containing protein | CPT03_RS04840 | Not Available | Positive | 1191052 - 1192233 | 43768.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

