Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | CPT03_RS04745 | Not Available | Positive | 1167056 - 1168336 | 48040.6 |
| duf1080 domain-containing protein | CPT03_RS04750 | Not Available | Positive | 1168374 - 1171820 | 123708.0 |
| gfo/idh/moca family protein | CPT03_RS04755 | Not Available | Positive | 1171893 - 1173347 | 53469.8 |
| gfo/idh/moca family protein | CPT03_RS04760 | Not Available | Positive | 1173329 - 1174411 | 40146.7 |
| histone h1 | CPT03_RS04765 | Not Available | Positive | 1174548 - 1174724 | 6415.71 |
| ycei family protein | CPT03_RS04770 | Not Available | Positive | 1174895 - 1175449 | 20551.2 |
| duf5777 family beta-barrel protein | CPT03_RS04775 | Not Available | Positive | 1175457 - 1176395 | 35278.0 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | CPT03_RS04780 | Not Available | Positive | 1176413 - 1176874 | 15782.5 |
| hypothetical protein | CPT03_RS04785 | Not Available | Positive | 1177009 - 1177668 | 22940.4 |
| pngase f n-terminal domain-containing protein | CPT03_RS04790 | Not Available | Negative | 1177728 - 1179407 | 62286.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

