Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | CPT03_RS04650 | Not Available | Positive | 1147141 - 1149906 | 103609.0 |
| hypothetical protein | CPT03_RS04655 | Not Available | Positive | 1149927 - 1151357 | 53694.0 |
| ycxb family protein | CPT03_RS04660 | Not Available | Positive | 1151557 - 1152090 | 21048.6 |
| chorismate mutase | CPT03_RS04665 | Not Available | Positive | 1152180 - 1152533 | 13176.2 |
| helix-turn-helix transcriptional regulator | CPT03_RS04670 | Not Available | Negative | 1152574 - 1152774 | 7236.8 |
| hypothetical protein | CPT03_RS04675 | Not Available | Negative | 1152784 - 1153230 | 17289.4 |
| hypothetical protein | CPT03_RS04680 | Not Available | Positive | 1153419 - 1154273 | 30843.3 |
| energy transducer tonb | CPT03_RS04685 | Not Available | Positive | 1154420 - 1155394 | 36646.9 |
| aldose epimerase family protein | CPT03_RS04695 | Not Available | Positive | 1156605 - 1157774 | 42507.3 |
| cytochrome-c peroxidase | CPT03_RS04700 | Not Available | Negative | 1157844 - 1159646 | 66651.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

