Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS04600 | Not Available | Positive | 1137134 - 1137859 | 26611.0 |
| molybdopterin-binding protein | CPT03_RS04605 | Not Available | Negative | 1137895 - 1138404 | 18756.0 |
| cytochrome-c peroxidase | CPT03_RS04610 | Not Available | Negative | 1138409 - 1138765 | 13434.9 |
| alkaline phosphatase family protein | CPT03_RS04615 | Not Available | Positive | 1139173 - 1140066 | 33159.8 |
| llm class flavin-dependent oxidoreductase | CPT03_RS04620 | Not Available | Negative | 1140121 - 1141143 | 37762.4 |
| gnat family n-acetyltransferase | CPT03_RS04625 | Not Available | Positive | 1141257 - 1141775 | 20211.9 |
| sulfatase | CPT03_RS04630 | Not Available | Positive | 1141816 - 1143339 | 56481.8 |
| pentapeptide repeat-containing protein | CPT03_RS04635 | Not Available | Positive | 1143482 - 1144390 | 33090.3 |
| serine hydrolase domain-containing protein | CPT03_RS04640 | Not Available | Negative | 1144374 - 1145675 | 48289.1 |
| acyltransferase family protein | CPT03_RS04645 | Not Available | Negative | 1145837 - 1146973 | 43641.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

