Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-binding-like beta-propeller repeat protein | CPT03_RS04550 | Not Available | Positive | 1122568 - 1124802 | 82073.5 |
| dinb family protein | CPT03_RS04555 | Not Available | Positive | 1124900 - 1125427 | 19571.7 |
| alpha/beta fold hydrolase | CPT03_RS04560 | Not Available | Negative | 1125440 - 1126324 | 33866.4 |
| atp-binding protein | CPT03_RS04565 | Not Available | Positive | 1126563 - 1130687 | 154395.0 |
| serine hydrolase | CPT03_RS04570 | Not Available | Negative | 1130691 - 1132502 | 67776.0 |
| hypothetical protein | CPT03_RS04575 | Not Available | Positive | 1132654 - 1133376 | 26920.6 |
| alpha-l-fucosidase | CPT03_RS04580 | Not Available | Negative | 1133442 - 1134938 | 57333.4 |
| atp-binding cassette domain-containing protein | CPT03_RS04585 | Not Available | Positive | 1135136 - 1135966 | 30814.2 |
| hypothetical protein | CPT03_RS04590 | Not Available | Positive | 1135973 - 1136752 | 29609.8 |
| gntr family transcriptional regulator | CPT03_RS04595 | Not Available | Positive | 1136754 - 1137131 | 14529.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

