Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase 6 family protein | CPT03_RS04500 | Not Available | Positive | 1113441 - 1114703 | 46839.9 |
| hypothetical protein | CPT03_RS04505 | Not Available | Negative | 1114733 - 1116265 | 56666.0 |
| hypothetical protein | CPT03_RS04510 | Not Available | Negative | 1116450 - 1116971 | 20399.8 |
| duf4382 domain-containing protein | CPT03_RS04515 | Not Available | Negative | 1117014 - 1117802 | 27559.4 |
| hypothetical protein | CPT03_RS04520 | Not Available | Positive | 1118066 - 1118341 | 10455.0 |
| hypothetical protein | CPT03_RS04525 | Not Available | Positive | 1118347 - 1119186 | 31025.5 |
| response regulator transcription factor | CPT03_RS04530 | Not Available | Positive | 1119201 - 1119875 | 25905.2 |
| sensor histidine kinase | CPT03_RS04535 | Not Available | Positive | 1119878 - 1121203 | 50440.8 |
| sulfurtransferase | CPT03_RS04540 | Not Available | Positive | 1121233 - 1122045 | 29843.2 |
| duf2200 domain-containing protein | CPT03_RS04545 | Not Available | Negative | 1122062 - 1122415 | 13692.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

