Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component i family protein | CPT03_RS00415 | Not Available | Negative | 99234 - 100487 | 47201.3 |
| adenylosuccinate synthase | CPT03_RS00420 | Not Available | Negative | 100577 - 101854 | 46843.4 |
| fur family transcriptional regulator | CPT03_RS00425 | Not Available | Negative | 101892 - 102383 | 19045.8 |
| rela/spot family protein | CPT03_RS00430 | Not Available | Negative | 102447 - 104654 | 83745.2 |
| duf4294 domain-containing protein | CPT03_RS00435 | Not Available | Positive | 104914 - 105531 | 23665.0 |
| glutathione peroxidase | CPT03_RS00440 | Not Available | Positive | 105536 - 106012 | 18109.8 |
| bacillithiol biosynthesis deacetylase bshb1 | CPT03_RS00445 | Not Available | Positive | 106040 - 106756 | 26793.1 |
| acyl-coa dehydrogenase family protein | CPT03_RS00450 | Not Available | Positive | 106826 - 108187 | 50627.4 |
| hypothetical protein | CPT03_RS00455 | Not Available | Negative | 108188 - 108592 | 15138.4 |
| l-lysine 6-transaminase | CPT03_RS00460 | Not Available | Negative | 108592 - 109923 | 49829.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

