Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | CPT03_RS04350 | Not Available | Negative | 1066156 - 1068390 | 83780.7 |
| beta-n-acetylhexosaminidase | CPT03_RS04355 | Not Available | Positive | 1068782 - 1070662 | 71044.6 |
| hypothetical protein | CPT03_RS04360 | Not Available | Negative | 1070672 - 1071103 | 16184.5 |
| duf4180 domain-containing protein | CPT03_RS04365 | Not Available | Negative | 1071100 - 1071456 | 13588.3 |
| duf6965 family protein | CPT03_RS04370 | Not Available | Negative | 1071468 - 1071677 | 7818.64 |
| helix-turn-helix transcriptional regulator | CPT03_RS04375 | Not Available | Negative | 1071704 - 1072624 | 34800.3 |
| helix-turn-helix domain-containing protein | CPT03_RS04380 | Not Available | Negative | 1072624 - 1073604 | 36673.2 |
| hypothetical protein | CPT03_RS04385 | Not Available | Positive | 1073778 - 1074080 | 11805.4 |
| lysophospholipid acyltransferase family protein | CPT03_RS04390 | Not Available | Positive | 1074128 - 1075105 | 38369.7 |
| glycosyl hydrolase | CPT03_RS04395 | Not Available | Positive | 1075217 - 1076272 | 40548.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

