Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS04300 | Not Available | Positive | 1048639 - 1050915 | 85164.6 |
| hypothetical protein | CPT03_RS04305 | Not Available | Positive | 1050947 - 1051303 | 13920.5 |
| lamg-like jellyroll fold domain-containing protein | CPT03_RS04310 | Not Available | Positive | 1051439 - 1054444 | 112421.0 |
| gdsl-type esterase/lipase family protein | CPT03_RS04315 | Not Available | Positive | 1054740 - 1056854 | 78753.8 |
| rraa family protein | CPT03_RS04320 | Not Available | Positive | 1057027 - 1057716 | 25369.8 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | CPT03_RS04325 | Not Available | Positive | 1057756 - 1060680 | 109777.0 |
| mandelate racemase/muconate lactonizing enzyme family protein | CPT03_RS04330 | Not Available | Positive | 1060698 - 1061864 | 43600.6 |
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS04335 | Not Available | Positive | 1061891 - 1062682 | 28523.2 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | CPT03_RS04340 | Not Available | Positive | 1062845 - 1065178 | 84628.8 |
| arac family transcriptional regulator | CPT03_RS04345 | Not Available | Positive | 1065219 - 1066094 | 33656.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

