Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS04250 | Not Available | Positive | 1035078 - 1035284 | 7431.41 |
| cupin domain-containing protein | CPT03_RS04255 | Not Available | Negative | 1035370 - 1035750 | 13850.0 |
| hypothetical protein | CPT03_RS04260 | Not Available | Positive | 1036008 - 1038329 | 85256.2 |
| aldo/keto reductase | CPT03_RS04265 | Not Available | Positive | 1038332 - 1039222 | 32963.8 |
| enolase c-terminal domain-like protein | CPT03_RS04270 | Not Available | Positive | 1039223 - 1040395 | 44982.2 |
| slc5 family protein | CPT03_RS04275 | Not Available | Positive | 1040410 - 1041981 | 57633.5 |
| l-rhamnose mutarotase | CPT03_RS04280 | Not Available | Positive | 1041989 - 1042420 | 16723.2 |
| helix-turn-helix domain-containing protein | CPT03_RS04285 | Not Available | Negative | 1042410 - 1043276 | 32857.6 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS04290 | Not Available | Positive | 1043505 - 1046636 | 116331.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS04295 | Not Available | Positive | 1046657 - 1048474 | 67891.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

