Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation repair protein | CPT03_RS04205 | Not Available | Negative | 1022913 - 1023680 | 30036.6 |
| hypothetical protein | CPT03_RS04210 | Not Available | Negative | 1023722 - 1024099 | 14250.3 |
| duf4242 domain-containing protein | CPT03_RS04215 | Not Available | Negative | 1024191 - 1024463 | 9943.91 |
| helix-turn-helix domain-containing protein | CPT03_RS04220 | Not Available | Negative | 1024719 - 1024994 | 10424.5 |
| nadph-dependent fmn reductase | CPT03_RS04225 | Not Available | Positive | 1025195 - 1025722 | 19237.6 |
| tonb-dependent receptor | CPT03_RS04230 | Not Available | Negative | 1025798 - 1028158 | 86094.4 |
| carbonic anhydrase family protein | CPT03_RS04235 | Not Available | Positive | 1028318 - 1028941 | 22694.2 |
| hypothetical protein | CPT03_RS22750 | Not Available | Positive | 1029024 - 1029302 | 9790.59 |
| cusa/czca family heavy metal efflux rnd transporter | CPT03_RS04240 | Not Available | Positive | 1029391 - 1033767 | 160525.0 |
| efflux rnd transporter periplasmic adaptor subunit | CPT03_RS04245 | Not Available | Positive | 1033779 - 1034978 | 43624.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

