Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 1005367 - 1005440 | Not Available |
| recombinase family protein | CPT03_RS04160 | Not Available | Negative | 1005644 - 1007290 | 62713.9 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | CPT03_RS04165 | Not Available | Positive | 1007653 - 1008447 | 30501.7 |
| type i restriction endonuclease subunit r | CPT03_RS04170 | Not Available | Positive | 1008549 - 1011620 | 119366.0 |
| class i sam-dependent dna methyltransferase | CPT03_RS04175 | Not Available | Positive | 1011624 - 1013225 | 61141.8 |
| restriction endonuclease subunit s | CPT03_RS04180 | Not Available | Positive | 1013212 - 1015161 | 74732.1 |
| atp-binding protein | CPT03_RS04185 | Not Available | Positive | 1015167 - 1018094 | 114058.0 |
| hypothetical protein | CPT03_RS04190 | Not Available | Positive | 1018099 - 1019196 | 42609.9 |
| giy-yig nuclease family protein | CPT03_RS04195 | Not Available | Positive | 1019210 - 1020061 | 31787.8 |
| lruc domain-containing protein | CPT03_RS04200 | Not Available | Positive | 1020599 - 1022818 | 79549.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

