Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | CPT03_RS04105 | Not Available | Positive | 991337 - 993583 | 84438.6 |
| right-handed parallel beta-helix repeat-containing protein | CPT03_RS04110 | Not Available | Positive | 993580 - 995385 | 67511.7 |
| is1182 family transposase | CPT03_RS04115 | Not Available | Positive | 995599 - 997086 | 57264.4 |
| gh36-type glycosyl hydrolase domain-containing protein | CPT03_RS04120 | Not Available | Negative | 997217 - 998521 | 48993.4 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | CPT03_RS04125 | Not Available | Positive | 998662 - 1000977 | 85324.3 |
| sterol desaturase family protein | CPT03_RS04130 | Not Available | Positive | 1001154 - 1002209 | 40921.8 |
| rbbp9/yden family alpha/beta hydrolase | CPT03_RS04135 | Not Available | Negative | 1002385 - 1002930 | 20468.5 |
| hypothetical protein | CPT03_RS04140 | Not Available | Positive | 1003043 - 1003651 | 23431.5 |
| aldo/keto reductase | CPT03_RS04145 | Not Available | Positive | 1003726 - 1004628 | 33988.8 |
| Trna-pro | Not Available | Not Available | Positive | 1005235 - 1005308 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

