Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS03900 | Not Available | Positive | 924168 - 925811 | 61239.3 |
| aryl-sulfate sulfotransferase | CPT03_RS03905 | Not Available | Positive | 925915 - 927342 | 53833.1 |
| rna polymerase sigma-70 factor | CPT03_RS03910 | Not Available | Positive | 927489 - 928052 | 21783.4 |
| fecr family protein | CPT03_RS03915 | Not Available | Positive | 928128 - 929291 | 43581.8 |
| tonb-dependent receptor | CPT03_RS03920 | Not Available | Positive | 929599 - 933009 | 125382.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS03925 | Not Available | Positive | 933038 - 934801 | 65485.3 |
| arylsulfatase | CPT03_RS03930 | Not Available | Positive | 934919 - 936415 | 56236.4 |
| hypothetical protein | CPT03_RS03935 | Not Available | Negative | 936488 - 936640 | 5785.23 |
| tonb-dependent receptor | CPT03_RS03945 | Not Available | Positive | 937047 - 939626 | 93204.5 |
| hypothetical protein | CPT03_RS03950 | Not Available | Positive | 939828 - 940190 | 12997.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

