Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mboat family o-acyltransferase | CPT03_RS03800 | Not Available | Positive | 892434 - 893696 | 48530.3 |
| hypothetical protein | CPT03_RS03805 | Not Available | Positive | 893700 - 894653 | 37153.7 |
| duf3784 domain-containing protein | CPT03_RS03810 | Not Available | Negative | 894721 - 895464 | 28606.4 |
| tetratricopeptide repeat protein | CPT03_RS03815 | Not Available | Positive | 895598 - 897328 | 64706.6 |
| exbd/tolr family protein | CPT03_RS03820 | Not Available | Positive | 897737 - 898273 | 19968.4 |
| arac family transcriptional regulator | CPT03_RS03825 | Not Available | Positive | 898358 - 899218 | 33103.6 |
| amidohydrolase | CPT03_RS03830 | Not Available | Positive | 899286 - 900620 | 48797.2 |
| amidohydrolase | CPT03_RS03835 | Not Available | Positive | 900637 - 901887 | 46169.5 |
| two-component regulator propeller domain-containing protein | CPT03_RS03840 | Not Available | Positive | 902054 - 906175 | 157438.0 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS03845 | Not Available | Positive | 906370 - 909555 | 115834.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

