Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3667 domain-containing protein | CPT03_RS03750 | Not Available | Positive | 881218 - 881937 | 27624.3 |
| hypothetical protein | CPT03_RS03755 | Not Available | Positive | 881942 - 882124 | 7122.93 |
| fimb/mfa2 family fimbrial subunit | CPT03_RS03760 | Not Available | Negative | 882267 - 883151 | 32981.7 |
| response regulator transcription factor | CPT03_RS03765 | Not Available | Positive | 883453 - 883815 | 13744.0 |
| heat repeat domain-containing protein | CPT03_RS03770 | Not Available | Positive | 883875 - 884876 | 38381.6 |
| glycosyltransferase family 2 protein | CPT03_RS03775 | Not Available | Positive | 884873 - 886297 | 54305.8 |
| lta synthase family protein | CPT03_RS03780 | Not Available | Positive | 886301 - 888322 | 76995.8 |
| hypothetical protein | CPT03_RS03785 | Not Available | Negative | 888319 - 889389 | 41689.8 |
| yaio family outer membrane beta-barrel protein | CPT03_RS03790 | Not Available | Negative | 889488 - 890723 | 47155.5 |
| gaf domain-containing sensor histidine kinase | CPT03_RS03795 | Not Available | Negative | 890762 - 891970 | 44874.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

