Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1574 family protein | CPT03_RS03700 | Not Available | Positive | 871313 - 872236 | 35664.9 |
| arsr/smtb family transcription factor | CPT03_RS03705 | Not Available | Positive | 873239 - 873559 | 12671.6 |
| srpbcc family protein | CPT03_RS03710 | Not Available | Positive | 873556 - 874050 | 19115.6 |
| aldo/keto reductase | CPT03_RS03715 | Not Available | Positive | 874266 - 875192 | 33589.4 |
| helix-turn-helix domain-containing protein | CPT03_RS03720 | Not Available | Positive | 875193 - 876014 | 31190.2 |
| voc family protein | CPT03_RS03725 | Not Available | Positive | 876161 - 876595 | 16000.8 |
| hd domain-containing protein | CPT03_RS03730 | Not Available | Negative | 876663 - 876854 | 7442.18 |
| hypothetical protein | CPT03_RS03735 | Not Available | Negative | 876969 - 878696 | 65237.6 |
| pqq-dependent sugar dehydrogenase | CPT03_RS03740 | Not Available | Negative | 878966 - 880165 | 43701.3 |
| response regulator transcription factor | CPT03_RS03745 | Not Available | Negative | 880278 - 881039 | 29687.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

