Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS03650 | Not Available | Positive | 861465 - 862235 | 28893.8 |
| hypothetical protein | CPT03_RS03655 | Not Available | Positive | 862574 - 863215 | 25213.3 |
| hypothetical protein | CPT03_RS03660 | Not Available | Negative | 863250 - 863465 | 7818.64 |
| adp-ribosylglycohydrolase family protein | CPT03_RS03665 | Not Available | Negative | 863686 - 865251 | 58765.8 |
| s1 family peptidase | CPT03_RS03670 | Not Available | Positive | 865630 - 866772 | 42661.2 |
| ycei family protein | CPT03_RS03675 | Not Available | Positive | 866776 - 867396 | 22625.8 |
| doxx family protein | CPT03_RS03680 | Not Available | Positive | 867588 - 867944 | 13323.3 |
| duf1398 domain-containing protein | CPT03_RS03685 | Not Available | Positive | 868349 - 868762 | 15645.2 |
| dihydrofolate reductase family protein | CPT03_RS03690 | Not Available | Positive | 868853 - 869422 | 21291.6 |
| mboat family o-acyltransferase | CPT03_RS03695 | Not Available | Positive | 870280 - 871311 | 40111.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

