Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemerythrin domain-containing protein | CPT03_RS03600 | Not Available | Positive | 854110 - 854586 | 19180.9 |
| 2fe-2s iron-sulfur cluster-binding protein | CPT03_RS03605 | Not Available | Positive | 854570 - 854905 | 12441.2 |
| uracil-dna glycosylase family protein | CPT03_RS03610 | Not Available | Positive | 854916 - 855395 | 18126.6 |
| hypothetical protein | CPT03_RS03615 | Not Available | Positive | 855337 - 855654 | 11725.6 |
| arac family transcriptional regulator | CPT03_RS03620 | Not Available | Negative | 855675 - 856457 | 29909.4 |
| tolc family protein | CPT03_RS03625 | Not Available | Positive | 856598 - 857935 | 51066.7 |
| hlyd family secretion protein | CPT03_RS03630 | Not Available | Positive | 857937 - 859001 | 39909.9 |
| mfs transporter | CPT03_RS03635 | Not Available | Positive | 858998 - 860587 | 60882.2 |
| hypothetical protein | CPT03_RS03640 | Not Available | Positive | 860600 - 860926 | 12659.5 |
| gtp cyclohydrolase i | CPT03_RS03645 | Not Available | Negative | 860967 - 861281 | 11845.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

