Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| no-inducible flavohemoprotein | CPT03_RS03560 | Not Available | Positive | 847561 - 848772 | 45283.4 |
| cbb3-type cytochrome c oxidase subunit i | CPT03_RS03565 | Not Available | Positive | 848846 - 850966 | 79605.5 |
| hypothetical protein | CPT03_RS23335 | Not Available | Positive | 850978 - 851439 | 17440.0 |
| c-type cytochrome | CPT03_RS23340 | Not Available | Positive | 851671 - 851997 | 11700.1 |
| hypothetical protein | CPT03_RS03575 | Not Available | Positive | 852007 - 852195 | 6867.28 |
| hypothetical protein | CPT03_RS03580 | Not Available | Positive | 852208 - 852468 | 9597.04 |
| cytochrome c | CPT03_RS03585 | Not Available | Positive | 852470 - 852883 | 15299.9 |
| group iii truncated hemoglobin | CPT03_RS03590 | Not Available | Positive | 852880 - 853266 | 14642.7 |
| group iii truncated hemoglobin | CPT03_RS03595 | Not Available | Positive | 853273 - 853671 | 15336.4 |
| hypothetical protein | CPT03_RS22745 | Not Available | Positive | 853646 - 854113 | 17486.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

