Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3347 domain-containing protein | CPT03_RS03515 | Not Available | Positive | 836375 - 836947 | 20578.2 |
| heme-binding domain-containing protein | CPT03_RS03520 | Not Available | Positive | 836954 - 837424 | 18079.1 |
| multicopper oxidase domain-containing protein | CPT03_RS03525 | Not Available | Positive | 837503 - 840232 | 103878.0 |
| heavy metal translocating p-type atpase | CPT03_RS03530 | Not Available | Positive | 840251 - 842803 | 91802.5 |
| hypothetical protein | CPT03_RS03535 | Not Available | Negative | 843638 - 843958 | 12279.1 |
| sam-dependent methyltransferase | CPT03_RS03540 | Not Available | Positive | 844367 - 844981 | 23404.2 |
| hypothetical protein | CPT03_RS22740 | Not Available | Positive | 844962 - 845252 | 11045.6 |
| crp/fnr family transcriptional regulator | CPT03_RS03545 | Not Available | Positive | 845284 - 845991 | 26510.0 |
| yoak family protein | CPT03_RS03550 | Not Available | Positive | 846045 - 846764 | 26644.7 |
| rrf2 family transcriptional regulator | CPT03_RS03555 | Not Available | Positive | 847064 - 847507 | 16163.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

