Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nramp family divalent metal transporter | CPT03_RS03465 | Not Available | Negative | 828357 - 829661 | 47631.0 |
| class i sam-dependent methyltransferase | CPT03_RS03470 | Not Available | Negative | 829880 - 830491 | 23227.5 |
| duf6691 family protein | CPT03_RS03475 | Not Available | Negative | 830621 - 831034 | 15283.3 |
| yeee/yede family protein | CPT03_RS03480 | Not Available | Negative | 831039 - 831596 | 19869.7 |
| mbl fold metallo-hydrolase | CPT03_RS03485 | Not Available | Negative | 831603 - 833027 | 52428.6 |
| sulfite exporter taue/safe family protein | CPT03_RS03490 | Not Available | Negative | 833111 - 833905 | 27912.5 |
| crp/fnr family transcriptional regulator | CPT03_RS03495 | Not Available | Negative | 833974 - 834615 | 24835.1 |
| hypothetical protein | CPT03_RS23330 | Not Available | Positive | 835003 - 835188 | 7371.94 |
| hypothetical protein | CPT03_RS03505 | Not Available | Positive | 835178 - 835618 | 16476.7 |
| duf3347 domain-containing protein | CPT03_RS03510 | Not Available | Positive | 835728 - 836216 | 18145.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

