Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hepn domain-containing protein | CPT03_RS03315 | Not Available | Positive | 794873 - 796240 | 53828.2 |
| hypothetical protein | CPT03_RS03320 | Not Available | Negative | 796750 - 798108 | 52427.1 |
| transposase | CPT03_RS03325 | Not Available | Positive | 798666 - 799730 | 40043.6 |
| cation-translocating p-type atpase | CPT03_RS03330 | Not Available | Negative | 800979 - 803483 | 92034.9 |
| vit family protein | CPT03_RS03335 | Not Available | Negative | 803566 - 804273 | 24719.1 |
| cytochrome b/b6 domain-containing protein | CPT03_RS03340 | Not Available | Negative | 804245 - 804928 | 25325.1 |
| duf3570 domain-containing protein | CPT03_RS03345 | Not Available | Negative | 804945 - 806165 | 45654.7 |
| duf4266 domain-containing protein | CPT03_RS23030 | Not Available | Negative | 806174 - 806287 | 3768.35 |
| fad:protein fmn transferase | CPT03_RS03355 | Not Available | Negative | 806406 - 807341 | 33912.0 |
| thioredoxin family protein | CPT03_RS03360 | Not Available | Negative | 807348 - 807782 | 16373.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

