Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS03215 | Not Available | Positive | 772114 - 774135 | 76308.5 |
| phospholipase d-like domain-containing protein | CPT03_RS03220 | Not Available | Positive | 774125 - 775165 | 41501.9 |
| tlpa family protein disulfide reductase | CPT03_RS03225 | Not Available | Negative | 776058 - 777557 | 56813.8 |
| redoxin domain-containing protein | CPT03_RS03230 | Not Available | Positive | 777725 - 780070 | 89459.4 |
| hypothetical protein | CPT03_RS03235 | Not Available | Positive | 780302 - 780577 | 10427.9 |
| hypothetical protein | CPT03_RS03240 | Not Available | Negative | 780574 - 781320 | 29398.3 |
| p-loop ntpase fold protein | CPT03_RS03245 | Not Available | Negative | 781408 - 783477 | 78872.8 |
| abih family protein | CPT03_RS03250 | Not Available | Negative | 783675 - 784844 | 45461.4 |
| nuclease-related domain-containing protein | CPT03_RS03255 | Not Available | Positive | 785034 - 785669 | 24770.8 |
| hypothetical protein | CPT03_RS03265 | Not Available | Positive | 786313 - 786618 | 11764.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

