Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS23325 | Not Available | Negative | 765100 - 765837 | 28113.7 |
| hypothetical protein | CPT03_RS03170 | Not Available | Negative | 765806 - 766009 | 7645.05 |
| hypothetical protein | CPT03_RS03175 | Not Available | Negative | 766018 - 766251 | 8848.91 |
| jab domain-containing protein | CPT03_RS03180 | Not Available | Positive | 766524 - 766994 | 17462.3 |
| hypothetical protein | CPT03_RS03185 | Not Available | Negative | 767011 - 767457 | 17604.8 |
| hypothetical protein | CPT03_RS03190 | Not Available | Negative | 767466 - 768017 | 21107.7 |
| hypothetical protein | CPT03_RS03195 | Not Available | Negative | 768001 - 768951 | 36519.7 |
| plasmid mobilization relaxosome protein mobc | CPT03_RS03200 | Not Available | Positive | 769470 - 769877 | 15866.6 |
| relaxase/mobilization nuclease domain-containing protein | CPT03_RS03205 | Not Available | Positive | 769862 - 771139 | 47730.0 |
| ywfcy domain-containing protein | CPT03_RS03210 | Not Available | Positive | 771149 - 772048 | 34322.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

