Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydei/ompd-associated family protein | CPT03_RS03110 | Not Available | Positive | 753723 - 754238 | 19718.0 |
| polyprenol monophosphomannose synthase | CPT03_RS03115 | Not Available | Negative | 754240 - 754971 | 28251.3 |
| peptide mfs transporter | CPT03_RS03120 | Not Available | Negative | 755073 - 756590 | 56025.3 |
| peptide mfs transporter | CPT03_RS03125 | Not Available | Negative | 756607 - 758433 | 67641.3 |
| hypothetical protein | CPT03_RS03130 | Not Available | Negative | 758668 - 759492 | 31619.0 |
| acetyl-coa c-acyltransferase | CPT03_RS03135 | Not Available | Negative | 759595 - 760773 | 40760.9 |
| ribbon-helix-helix domain-containing protein | CPT03_RS03140 | Not Available | Negative | 760852 - 761031 | 6953.32 |
| spfh domain-containing protein | CPT03_RS03145 | Not Available | Negative | 761040 - 761900 | 31502.7 |
| hd family phosphohydrolase | CPT03_RS03150 | Not Available | Positive | 762093 - 764171 | 79499.0 |
| Trna-ser | Not Available | Not Available | Positive | 764237 - 764326 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

