Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CPT03_RS03010 | Not Available | Negative | 732059 - 733243 | 44243.4 |
| aspartate kinase | CPT03_RS03015 | Not Available | Negative | 733236 - 734513 | 48243.2 |
| duf3298 and duf4163 domain-containing protein | CPT03_RS03020 | Not Available | Negative | 734513 - 735322 | 30401.1 |
| gnat family n-acetyltransferase | CPT03_RS03025 | Not Available | Negative | 735324 - 735788 | 17812.1 |
| yggs family pyridoxal phosphate-dependent enzyme | CPT03_RS03030 | Not Available | Negative | 735785 - 736474 | 25915.3 |
| duf4296 domain-containing protein | CPT03_RS03035 | Not Available | Positive | 736547 - 737161 | 22690.3 |
| endonuclease muts2 | CPT03_RS03040 | Not Available | Positive | 737175 - 739547 | 89615.9 |
| pqq-dependent sugar dehydrogenase | CPT03_RS03045 | Not Available | Positive | 739594 - 740682 | 39214.6 |
| coa transferase subunit a | CPT03_RS03050 | Not Available | Positive | 740732 - 741433 | 25366.6 |
| coa transferase subunit b | CPT03_RS03055 | Not Available | Positive | 741444 - 742103 | 23368.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

