Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu-ccdc81 and spor domain-containing protein | CPT03_RS00265 | Not Available | Negative | 60808 - 62184 | 50666.8 |
| tonb-dependent receptor | CPT03_RS00270 | Not Available | Negative | 62239 - 63942 | 63287.9 |
| tetratricopeptide repeat protein | CPT03_RS00275 | Not Available | Negative | 63954 - 66971 | 115448.0 |
| aspartate carbamoyltransferase catalytic subunit | CPT03_RS00280 | Not Available | Negative | 67105 - 68037 | 34390.1 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | CPT03_RS00285 | Not Available | Negative | 68039 - 68587 | 21007.4 |
| beta-n-acetylhexosaminidase | CPT03_RS00290 | Not Available | Negative | 68673 - 70286 | 61494.2 |
| 30s ribosomal protein s1 | CPT03_RS00295 | Not Available | Negative | 70399 - 72333 | 71778.2 |
| pepsy-associated tm helix domain-containing protein | CPT03_RS00300 | Not Available | Negative | 72548 - 73708 | 44249.9 |
| tonb-dependent receptor | CPT03_RS00305 | Not Available | Negative | 73709 - 76126 | 89296.0 |
| laci family dna-binding transcriptional regulator | CPT03_RS00310 | Not Available | Positive | 76399 - 77415 | 37998.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

