Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | CPT03_RS02910 | Not Available | Negative | 710591 - 712441 | 69074.4 |
| arac family transcriptional regulator | CPT03_RS02915 | Not Available | Negative | 712457 - 713323 | 33466.0 |
| two-component system response regulator | CPT03_RS02920 | Not Available | Positive | 713669 - 714127 | 16865.5 |
| recombinase family protein | CPT03_RS02925 | Not Available | Positive | 714162 - 714476 | 12269.0 |
| hypothetical protein | CPT03_RS02930 | Not Available | Negative | 714471 - 714680 | 7989.37 |
| sulfatase-like hydrolase/transferase | CPT03_RS02935 | Not Available | Positive | 715020 - 717089 | 76575.9 |
| ubix family flavin prenyltransferase | CPT03_RS02940 | Not Available | Positive | 717293 - 717856 | 20756.2 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | CPT03_RS02945 | Not Available | Positive | 717893 - 719212 | 49296.1 |
| prolipoprotein diacylglyceryl transferase | CPT03_RS02950 | Not Available | Positive | 719244 - 720398 | 43051.0 |
| inositol monophosphatase family protein | CPT03_RS02955 | Not Available | Positive | 720413 - 721207 | 29397.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

