Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS02810 | Not Available | Positive | 686879 - 687187 | 11816.4 |
| type b 50s ribosomal protein l31 | CPT03_RS02815 | Not Available | Positive | 687272 - 687520 | 9777.66 |
| putative sugar nucleotidyl transferase | CPT03_RS02820 | Not Available | Positive | 687593 - 688765 | 43465.6 |
| triose-phosphate isomerase | CPT03_RS02825 | Not Available | Positive | 688775 - 689536 | 27419.6 |
| 50s ribosomal protein l11 methyltransferase | CPT03_RS02830 | Not Available | Positive | 689536 - 690372 | 31657.3 |
| udp-n-acetylmuramate--l-alanine ligase | CPT03_RS02835 | Not Available | Positive | 690378 - 691736 | 50940.0 |
| helix-turn-helix domain-containing protein | CPT03_RS02840 | Not Available | Positive | 691774 - 692103 | 12572.2 |
| n-acetyltransferase | CPT03_RS02845 | Not Available | Negative | 692108 - 693229 | 43514.4 |
| hypothetical protein | CPT03_RS23225 | Not Available | Negative | 693299 - 693433 | 5194.28 |
| two-component regulator propeller domain-containing protein | CPT03_RS02855 | Not Available | Negative | 693870 - 696821 | 112910.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

