Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | CPT03_RS02710 | Not Available | Positive | 667047 - 667730 | 24889.0 |
| duf5723 family protein | CPT03_RS02715 | Not Available | Negative | 667734 - 669176 | 54662.0 |
| hypothetical protein | CPT03_RS02720 | Not Available | Negative | 669173 - 670759 | 60228.0 |
| duf423 domain-containing protein | CPT03_RS02725 | Not Available | Positive | 670857 - 671252 | 14175.8 |
| primosomal protein n' | CPT03_RS02730 | Not Available | Positive | 671252 - 673753 | 94533.2 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | CPT03_RS02735 | Not Available | Positive | 673853 - 674509 | 24693.9 |
| ssra-binding protein smpb | CPT03_RS02740 | Not Available | Negative | 674523 - 674972 | 17510.3 |
| nramp family divalent metal transporter | CPT03_RS02745 | Not Available | Negative | 674996 - 676876 | 68903.4 |
| metal-dependent transcriptional regulator | CPT03_RS02750 | Not Available | Negative | 676878 - 677531 | 24748.9 |
| lrp/asnc family transcriptional regulator | CPT03_RS02755 | Not Available | Positive | 677673 - 678143 | 17956.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

