Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaminase family protein | CPT03_RS02610 | Not Available | Positive | 646140 - 648587 | 90353.2 |
| beta-l-arabinofuranosidase domain-containing protein | CPT03_RS02615 | Not Available | Positive | 648595 - 650604 | 77020.5 |
| response regulator | CPT03_RS02620 | Not Available | Negative | 650694 - 651101 | 15559.2 |
| hybrid sensor histidine kinase/response regulator | CPT03_RS02625 | Not Available | Negative | 651091 - 652170 | 41044.2 |
| 7tm diverse intracellular signaling domain-containing protein | CPT03_RS02630 | Not Available | Negative | 652186 - 654300 | 80039.6 |
| hypothetical protein | CPT03_RS02635 | Not Available | Negative | 654305 - 654943 | 23664.7 |
| rv1355c family protein | CPT03_RS02640 | Not Available | Negative | 655002 - 657323 | 88104.3 |
| response regulator | CPT03_RS02645 | Not Available | Positive | 657538 - 658005 | 18049.9 |
| type ix secretion system membrane protein porp/sprf | CPT03_RS02650 | Not Available | Positive | 658094 - 659110 | 38085.5 |
| rna polymerase factor sigma-54 | CPT03_RS02655 | Not Available | Negative | 659125 - 660597 | 56547.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

