Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS02560 | Not Available | Positive | 635022 - 637556 | 95729.1 |
| duf4256 domain-containing protein | CPT03_RS02565 | Not Available | Negative | 637587 - 638153 | 21949.7 |
| doxx family protein | CPT03_RS02570 | Not Available | Negative | 638160 - 638543 | 14310.2 |
| srpbcc family protein | CPT03_RS02575 | Not Available | Negative | 638550 - 639017 | 17839.6 |
| arsr/smtb family transcription factor | CPT03_RS02580 | Not Available | Negative | 639023 - 639346 | 12420.1 |
| ydei/ompd-associated family protein | CPT03_RS02585 | Not Available | Positive | 639469 - 640050 | 22447.9 |
| amino acid permease | CPT03_RS02590 | Not Available | Positive | 640147 - 641586 | 52904.9 |
| mfs transporter | CPT03_RS02595 | Not Available | Negative | 641718 - 642956 | 45467.0 |
| lysr substrate-binding domain-containing protein | CPT03_RS02600 | Not Available | Positive | 643056 - 643931 | 32871.4 |
| hypothetical protein | CPT03_RS02605 | Not Available | Positive | 644027 - 646123 | 79470.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

