Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | CPT03_RS02510 | Not Available | Positive | 620620 - 621588 | 36867.2 |
| beta-l-arabinofuranosidase domain-containing protein | CPT03_RS02515 | Not Available | Negative | 621591 - 624116 | 94216.1 |
| glycoside hydrolase family protein | CPT03_RS02520 | Not Available | Positive | 624334 - 625995 | 62504.8 |
| sensor histidine kinase | CPT03_RS02525 | Not Available | Negative | 626012 - 627250 | 47182.7 |
| response regulator transcription factor | CPT03_RS02530 | Not Available | Negative | 627250 - 627924 | 26039.2 |
| duf4856 domain-containing protein | CPT03_RS02535 | Not Available | Positive | 628067 - 629272 | 43058.9 |
| imelysin family protein | CPT03_RS02540 | Not Available | Positive | 629357 - 630505 | 41771.9 |
| httm domain-containing protein | CPT03_RS02545 | Not Available | Positive | 630519 - 631868 | 52508.3 |
| tonb-dependent receptor family protein | CPT03_RS02550 | Not Available | Positive | 631846 - 634074 | 83865.8 |
| hypothetical protein | CPT03_RS02555 | Not Available | Negative | 634347 - 634607 | 10312.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

