Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS02465 | Not Available | Negative | 612206 - 612400 | 7010.57 |
| hypothetical protein | CPT03_RS02470 | Not Available | Positive | 612546 - 613322 | 29792.3 |
| voc family protein | CPT03_RS02475 | Not Available | Positive | 613553 - 613984 | 16115.9 |
| signal peptidase i | CPT03_RS02480 | Not Available | Positive | 614113 - 615303 | 45745.1 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | CPT03_RS02485 | Not Available | Positive | 615695 - 618046 | 86852.6 |
| heme-binding domain-containing protein | CPT03_RS02490 | Not Available | Positive | 618124 - 618552 | 16505.6 |
| dinb family protein | CPT03_RS02495 | Not Available | Negative | 618549 - 618995 | 17166.4 |
| hypothetical protein | CPT03_RS22925 | Not Available | Positive | 619480 - 619707 | 8238.9 |
| hypothetical protein | CPT03_RS22930 | Not Available | Positive | 619673 - 620029 | 13633.4 |
| maoc family dehydratase | CPT03_RS02505 | Not Available | Negative | 620022 - 620480 | 17412.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

