Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 47756 - 47832 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 48058 - 50934 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 51042 - 51153 | Not Available |
| acyl-acp desaturase | CPT03_RS00230 | Not Available | Positive | 51342 - 52322 | 38103.7 |
| methylmalonyl-coa mutase family protein | CPT03_RS00235 | Not Available | Negative | 52323 - 55685 | 125436.0 |
| alkaline phosphatase pafa | CPT03_RS00240 | Not Available | Negative | 55771 - 57435 | 61668.1 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | CPT03_RS00245 | Not Available | Negative | 57546 - 58832 | 47186.9 |
| energy transducer tonb | CPT03_RS00250 | Not Available | Negative | 58876 - 59694 | 28615.7 |
| exbd/tolr family protein | CPT03_RS00255 | Not Available | Negative | 59694 - 60095 | 14925.3 |
| mota/tolq/exbb proton channel family protein | CPT03_RS00260 | Not Available | Negative | 60095 - 60805 | 25927.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

