Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulase family glycosylhydrolase | CPT03_RS02410 | Not Available | Positive | 593150 - 594625 | 54407.4 |
| sialate o-acetylesterase | CPT03_RS02415 | Not Available | Positive | 594687 - 596675 | 74122.8 |
| family 43 glycosylhydrolase | CPT03_RS02420 | Not Available | Positive | 596685 - 598196 | 56567.2 |
| carboxylesterase/lipase family protein | CPT03_RS02425 | Not Available | Positive | 598205 - 599770 | 56883.1 |
| hybrid sensor histidine kinase/response regulator transcription factor | CPT03_RS02430 | Not Available | Positive | 600029 - 604204 | 158082.0 |
| beta-glucosidase family protein | CPT03_RS02435 | Not Available | Positive | 604444 - 606639 | 80950.8 |
| hypothetical protein | CPT03_RS02440 | Not Available | Positive | 606836 - 607423 | 21524.7 |
| c-type cytochrome | CPT03_RS02445 | Not Available | Positive | 607428 - 609368 | 71470.6 |
| duf1080 domain-containing protein | CPT03_RS02450 | Not Available | Positive | 609399 - 610169 | 28056.5 |
| alpha-l-fucosidase | CPT03_RS02460 | Not Available | Negative | 610539 - 612059 | 57826.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

