Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | CPT03_RS02265 | Not Available | Positive | 560122 - 562311 | 83900.1 |
| tolc family protein | CPT03_RS02270 | Not Available | Positive | 562323 - 563666 | 51206.6 |
| glycosyltransferase family 2 protein | CPT03_RS02275 | Not Available | Positive | 563701 - 564552 | 32935.3 |
| hypothetical protein | CPT03_RS02280 | Not Available | Positive | 564775 - 565518 | 28925.6 |
| glycosyltransferase family 32 protein | CPT03_RS02285 | Not Available | Positive | 565566 - 566141 | 22735.9 |
| hypothetical protein | CPT03_RS02290 | Not Available | Positive | 566549 - 566728 | 6935.34 |
| dde-type integrase/transposase/recombinase | CPT03_RS02295 | Not Available | Negative | 566854 - 567726 | 33725.6 |
| hypothetical protein | CPT03_RS22735 | Not Available | Negative | 567735 - 568037 | 11775.2 |
| hypothetical protein | CPT03_RS02300 | Not Available | Positive | 568132 - 568344 | 7687.1 |
| hypothetical protein | CPT03_RS02305 | Not Available | Positive | 568354 - 569619 | 48554.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

