Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parallel beta-helix domain-containing protein | CPT03_RS22665 | Not Available | Negative | 5347791 - 5349074 | 46714.2 |
| tonb-dependent receptor domain-containing protein | CPT03_RS22670 | Not Available | Negative | 5349076 - 5351826 | 100838.0 |
| lyttr family dna-binding domain-containing protein | CPT03_RS22675 | Not Available | Negative | 5351909 - 5352823 | 34738.4 |
| serine/threonine protein kinase | CPT03_RS22680 | Not Available | Negative | 5352864 - 5354408 | 57372.8 |
| serine/threonine protein kinase | CPT03_RS22685 | Not Available | Negative | 5354427 - 5355719 | 48059.1 |
| fha domain-containing protein | CPT03_RS22690 | Not Available | Negative | 5355731 - 5356519 | 29620.1 |
| ftsw/roda/spove family cell cycle protein | CPT03_RS22695 | Not Available | Negative | 5356541 - 5360566 | 149294.0 |
| pp2c family protein-serine/threonine phosphatase | CPT03_RS22700 | Not Available | Negative | 5360568 - 5362028 | 53692.8 |
| hypothetical protein | CPT03_RS22705 | Not Available | Negative | 5362123 - 5363073 | 36643.4 |
| hypothetical protein | CPT03_RS22710 | Not Available | Positive | 5363207 - 5363629 | 15030.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

