Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | CPT03_RS22630 | Not Available | Positive | 5337816 - 5338964 | 44245.5 |
| tonb-dependent receptor | CPT03_RS22635 | Not Available | Positive | 5339133 - 5341460 | 86723.9 |
| duf4249 domain-containing protein | CPT03_RS22640 | Not Available | Positive | 5341466 - 5342278 | 29654.0 |
| hypothetical protein | CPT03_RS23280 | Not Available | Negative | 5342473 - 5342595 | 4530.63 |
| hypothetical protein | CPT03_RS22645 | Not Available | Positive | 5342645 - 5342833 | 7052.95 |
| duf4143 domain-containing protein | CPT03_RS22650 | Not Available | Negative | 5342855 - 5343307 | 18037.3 |
| hypothetical protein | CPT03_RS23210 | Not Available | Positive | 5343367 - 5343492 | 4645.5 |
| glycoside hydrolase family 2 protein | CPT03_RS23215 | Not Available | Positive | 5343656 - 5345098 | 53488.2 |
| hypothetical protein | CPT03_RS23220 | Not Available | Positive | 5345181 - 5346512 | 49314.6 |
| so2930 family diheme c-type cytochrome | CPT03_RS22660 | Not Available | Negative | 5346714 - 5347778 | 39425.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

