Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | CPT03_RS22580 | Not Available | Positive | 5322872 - 5324020 | 41996.6 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | CPT03_RS22585 | Not Available | Positive | 5324033 - 5324746 | 26911.5 |
| aldehyde dehydrogenase family protein | CPT03_RS22590 | Not Available | Positive | 5324743 - 5326110 | 50581.4 |
| rna polymerase sigma factor | CPT03_RS22595 | Not Available | Positive | 5326207 - 5326797 | 22647.4 |
| fecr family protein | CPT03_RS22600 | Not Available | Positive | 5326864 - 5328024 | 43408.5 |
| tonb-dependent receptor | CPT03_RS22605 | Not Available | Positive | 5328196 - 5331558 | 123178.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS22610 | Not Available | Positive | 5331563 - 5333197 | 61511.0 |
| gh116 family glycosyl hydrolase | CPT03_RS22615 | Not Available | Positive | 5333311 - 5336031 | 101264.0 |
| rbsd/fucu domain-containing protein | CPT03_RS22620 | Not Available | Positive | 5336043 - 5336606 | 21307.8 |
| pirin family protein | CPT03_RS22625 | Not Available | Positive | 5336703 - 5337575 | 31481.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

