Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | CPT03_RS22530 | Not Available | Negative | 5306576 - 5309626 | 111691.0 |
| efflux rnd transporter periplasmic adaptor subunit | CPT03_RS22535 | Not Available | Negative | 5309643 - 5310677 | 37235.6 |
| tolc family protein | CPT03_RS22540 | Not Available | Negative | 5310700 - 5312052 | 51094.4 |
| tetr/acrr family transcriptional regulator | CPT03_RS22545 | Not Available | Negative | 5312181 - 5312795 | 24030.0 |
| rna polymerase sigma factor | CPT03_RS22550 | Not Available | Positive | 5313166 - 5313759 | 22572.3 |
| fecr family protein | CPT03_RS22555 | Not Available | Positive | 5313834 - 5314970 | 42371.1 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS22560 | Not Available | Positive | 5315160 - 5318531 | 125275.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | CPT03_RS22565 | Not Available | Positive | 5318570 - 5320126 | 58303.1 |
| ethanolamine permease | CPT03_RS22570 | Not Available | Positive | 5320168 - 5321484 | 47112.0 |
| glutamine synthetase family protein | CPT03_RS22575 | Not Available | Positive | 5321481 - 5322839 | 50941.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

