Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CPT03_RS22480 | Not Available | Positive | 5292963 - 5294396 | 51429.6 |
| deoxycytidylate deaminase | CPT03_RS22485 | Not Available | Positive | 5294495 - 5294944 | 16362.4 |
| glutamine-hydrolyzing gmp synthase | CPT03_RS22490 | Not Available | Positive | 5294953 - 5296482 | 56485.8 |
| abc transporter substrate-binding protein | CPT03_RS22495 | Not Available | Positive | 5296439 - 5297671 | 46783.6 |
| rna methyltransferase | CPT03_RS22500 | Not Available | Positive | 5297668 - 5298831 | 45033.0 |
| marc family protein | CPT03_RS22505 | Not Available | Negative | 5298991 - 5299560 | 20663.3 |
| amino acid permease | CPT03_RS22510 | Not Available | Negative | 5299649 - 5301346 | 60787.9 |
| sodium-translocating pyrophosphatase | CPT03_RS22515 | Not Available | Negative | 5301479 - 5303857 | 82562.2 |
| hypothetical protein | CPT03_RS22520 | Not Available | Positive | 5304384 - 5305756 | 48462.5 |
| hypothetical protein | CPT03_RS22525 | Not Available | Negative | 5305797 - 5306468 | 25230.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

