Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kup/hak/kt family potassium transporter | CPT03_RS22380 | Not Available | Positive | 5271131 - 5273083 | 72793.2 |
| amino acid permease | CPT03_RS22385 | Not Available | Negative | 5273358 - 5275313 | 72117.1 |
| m3 family oligoendopeptidase | CPT03_RS22390 | Not Available | Negative | 5275369 - 5277084 | 66454.1 |
| ubia-like polyprenyltransferase | CPT03_RS22395 | Not Available | Negative | 5277087 - 5277953 | 32341.3 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | CPT03_RS22400 | Not Available | Negative | 5277963 - 5278592 | 23896.1 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | CPT03_RS22405 | Not Available | Positive | 5278645 - 5279376 | 27718.5 |
| outer membrane beta-barrel protein | CPT03_RS22410 | Not Available | Positive | 5279373 - 5280098 | 27443.9 |
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS22415 | Not Available | Positive | 5280150 - 5280908 | 27658.5 |
| gatb/yqey domain-containing protein | CPT03_RS22420 | Not Available | Positive | 5280927 - 5281373 | 16364.0 |
| alpha/beta fold hydrolase | CPT03_RS22425 | Not Available | Positive | 5281483 - 5282247 | 29003.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

